DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG3088

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster


Alignment Length:289 Identity:68/289 - (23%)
Similarity:116/289 - (40%) Gaps:69/289 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKCLVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGE 65
            ||.||:...|.:::..|||.             ....|:..:..|..:..|.|||.|.:  .||:
  Fly     1 MKLLVVFLGLTLVAAGSAKK-------------DSEDPDHIITNGSPAYEGQAPYVVGM--AFGQ 50

  Fly    66 H--VCGGSIIAPQWILTAAHCMEW----PIQY---------LKIVTGTVDYTRPGAEYLVDGSKI 115
            .  .|.|:||...||||:|.|:..    .|.:         ..:..||.:|        |.|:: 
  Fly    51 SNIWCSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLSQAQFTVTVGTSEY--------VTGNQ- 106

  Fly   116 HCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK--------LTLTGWGSTKTW 172
                       .:||:...: :.:.:....:      :||.:.::        ..:.|||.|...
  Fly   107 -----------HLALVRVPR-VGFSNRVNRV------ALPSLRNRSQRYENWWANVCGWGVTTFS 153

  Fly   173 GRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLV-DANQTLVGV 236
            ...:..||.:||..:.::.|.: ...:..:|:..:||.|..|..:|.||:|.||: ..:.|:||:
  Fly   154 NGLTDALQCVDLQIMSNNECIA-FYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITKQDSTVVGI 217

  Fly   237 VNW--GEACAIGYPDVFGSVAYYHDWIEQ 263
            ..:  ...|.:|.|..|..:....|||.|
  Fly   218 SAFVASNGCTLGLPAGFARITSALDWIHQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 56/245 (23%)
Tryp_SPc 42..263 CDD:238113 58/246 (24%)
CG3088NP_648334.1 Tryp_SPc 29..246 CDD:238113 58/246 (24%)
Tryp_SPc 29..244 CDD:214473 56/244 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436838
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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