DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Jon66Cii

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster


Alignment Length:289 Identity:84/289 - (29%)
Similarity:112/289 - (38%) Gaps:64/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKCLVLISVLVILSQCSA--------KSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQV 57
            ||..:.|..|.:.|...|        |...:|.:..          :.|:..|..:..|.|||.|
  Fly     1 MKAFIAILALAVASASGATMPRLATEKLTPVHTKDM----------QGRITNGYPAEEGKAPYTV 55

  Fly    58 SIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRP--GAEYLVDGSKIH---- 116
            . :...|...|||||||..|:|||.||:           |..|....  ||.:..:....|    
  Fly    56 G-LGFSGGWWCGGSIIAHDWVLTAEHCI-----------GDADSVTVYFGATWRTNAQFTHWVGN 108

  Fly   117 ---CSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK--------LTLTGWGSTK 170
               ..|...    |||||.    |.:.|...   :.:|..||...|:        ....|||.|.
  Fly   109 GNFIKHSSA----DIALIR----IPHVDFWH---MVNKVELPSYNDRYNDYNEWWAVACGWGGTY 162

  Fly   171 TWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDANQT-LV 234
            ........||.:||..|.:..|.....:   :.:..:|..|.:|:.:|.||||||||..:.| ||
  Fly   163 DGSPLPDYLQCVDLQIIHNSECSGYYGS---VGDNILCVRTPDGKSTCGGDSGGPLVTHDGTKLV 224

  Fly   235 GVVNWGE--ACAIGYPDVFGSVAYYHDWI 261
            ||.|:|.  .|..|.|..|..|.|:.|||
  Fly   225 GVTNFGSVAGCQSGAPAGFQRVTYHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 74/239 (31%)
Tryp_SPc 42..263 CDD:238113 75/240 (31%)
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 74/239 (31%)
Tryp_SPc 40..256 CDD:238113 75/240 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436772
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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