DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and CG16998

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_648134.1 Gene:CG16998 / 38847 FlyBaseID:FBgn0035795 Length:258 Species:Drosophila melanogaster


Alignment Length:539 Identity:90/539 - (16%)
Similarity:183/539 - (33%) Gaps:147/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 QIFIDE--INVDVELTNEHKKQ--AKSNP-----------LGNLGDSSSY---GFMNKIIENMSL 127
            :||.||  |....|....|:.|  |..:|           |.::|.:|:.   |.::..:::..:
  Fly   208 KIFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFM 272

  Fly   128 YISSVEINFDS---DVFGGSFMLQRLSVESRSPGWA--------------QVKDLRQTRITCSET 175
            ....:...|.|   |:..|...|.:||..:|....|              .:.|.|...|..::.
  Fly   273 SYDYILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADR 337

  Fly   176 NRTLMFKQLSWHLLRIEASAKTSKNEQRSKINAPL--RLITSGGKIRI--ALKKNVNDGSVIHAR 236
            ...:|      .|..:....:....::..:|.|||  ||..|..|:::  ...|:::...  |..
  Fly   338 LHNMM------TLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQ--HHE 394

  Fly   237 IQTIL----DDILWVATLPQLRSAI---------------SFASYIAKLVKESQKNDVITTSSG- 281
            :..:|    |:.:..:.:.:|..|:               |..|...|::|:....|.|....| 
  Fly   395 MSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGL 459

  Fly   282 -----NDNPFMKAAG--NSATADA-------------STISSAYNIFYFDQT-SYHLHVKKIDLH 325
                 |:....||.|  :...::.             :...|.:.:...|.| ...:.::..::|
  Fly   460 RLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKEMH 524

  Fly   326 LCDDAHTASDYPPDWDIESG-------AMQVTLYQVLIDVYPKAHAQSDRSTWMRYSNTNPIAAW 383
            |    .....:...|..:.|       .:|:..:...:..:   |.::.........::.|:.: 
  Fly   525 L----QAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTW---HFETMSKDGSSICSSEPLCS- 581

  Fly   384 FRNHLSEQFLTL--LGNAEGQTTRTRLERCWPQLIGFFVVLRVHDLTIQCVSDMNTKKDALTNL- 445
            |.:|..:...:.  .||.||..              :.:|:....:|:|...:.:|..|.|... 
  Fly   582 FPSHAEDCPFSYKPSGNQEGPV--------------YVIVIENEKMTVQEFPENSTVSDLLRRAG 632

  Fly   446 -FESERHLHSLPSDQQIVHVEFGAFYHPHSDKLPVPNSAVYFQLGPFTISFDERTMRWCCYVAHA 509
             ..|...::|:|:.:::         .|..::.||.:.....::|...                .
  Fly   633 PGSSRWSMYSIPAKEEL---------RPRLNQTPVSDLKCKLKMGDVV----------------E 672

  Fly   510 LSSAIEDGNLIPENELDIQ 528
            |:.||.|.:|....| :||
  Fly   673 LTPAIPDKSLTEYRE-EIQ 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 44/239 (18%)
CG16998NP_648134.1 Tryp_SPc 24..242 CDD:214473 10/33 (30%)

Return to query results.
Submit another query.