DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG6462

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster


Alignment Length:326 Identity:95/326 - (29%)
Similarity:142/326 - (43%) Gaps:86/326 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVILSQCSAKSVK--------------------IHRRHQLNHHLGHVKPE-------------TR 41
            |::||....||.:                    :.||.||.:....::.|             ||
  Fly    12 LLLLSSTLVKSSEPWLDTFEHPKEETPDDDDAIMERRWQLGYENFRLRCEKFEMEGNQTAAVRTR 76

  Fly    42 VIGGVDSPTGFAPYQVS-IMNTFGEHV--CGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTR 103
            :.||..:..|..||||. ::...|..:  ||||:|..|::||||||:...|. .||.||...:  
  Fly    77 IAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIA-AKIYTGATVF-- 138

  Fly   104 PGAEYLVDGSKIHCSHDK----PAY-----HNDIALIHTAKPIVYDDLTQPIKLASKGSLPK--V 157
              |:......::..:|..    |.|     ::|:|||...:.:...:..|||:||.:.....  |
  Fly   139 --ADVEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLV 201

  Fly   158 GDKLTLTGWG----STKTWGRYSTQLQKIDLNYIDHDNC----------QSRVRNANWLSEGHVC 208
            |..:||:|||    ||   .:.:..||.:|...||.:.|          |.|          |:|
  Fly   202 GKVVTLSGWGYLGDST---DKRTRLLQYLDAEVIDQERCICYFLPGLVSQRR----------HLC 253

  Fly   209 TFTQEGEGSCHGDSGGPLVDANQT---LVGVVNWG--EACAIGYPDVFGSVAYYHDWIEQM--MT 266
            |....|.|:|:||||||:|...:.   |:||.::|  |.|.:|.|.|:..:..|..||.|.  ||
  Fly   254 TDGSNGRGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGCEVGGPTVYTRITAYLPWIRQQTAMT 318

  Fly   267 D 267
            :
  Fly   319 N 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 80/253 (32%)
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 80/254 (31%)

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