DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG3700

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster


Alignment Length:273 Identity:74/273 - (27%)
Similarity:119/273 - (43%) Gaps:66/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIGGVDSPTGFAPYQVSIMNTFGEH-----------VCGGSIIAPQWILTAAHCME--------- 86
            ::||..:.....|:    |...|.|           .||||::.|:::||||||:|         
  Fly   102 IVGGTKASGKEFPF----MALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESKAERL 162

  Fly    87 ---WPIQYLKIVTGTVDYTRPGAEYLVDGSK-----IHCSHD----KPAYHNDIALIHTAKPIVY 139
               :......:..|.:||.....:.||...:     :|..:|    :..:.|||||:...:...:
  Fly   163 DPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFKNDIALVELDRKAEF 227

  Fly   140 DDLTQPIKLASKGSLPKVGD---KLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANW 201
            :|....:.|.     |..|:   ::|..|||.|.. |..|:.|.|::|.....:.||.|:|.:  
  Fly   228 NDHVAAVCLP-----PDSGNDVQQVTAAGWGFTAD-GVKSSHLLKVNLQRFSDEVCQKRLRFS-- 284

  Fly   202 LSEGHVCTFTQEGEGS-------CHGDSGG------PLVDANQTLVGVVNWGEAC-AIGYPDVFG 252
                 :.|.||...||       |:|||||      ||....:.::|:|::|..| :.|.|.|:.
  Fly   285 -----IDTRTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQVIGIVSYGLVCGSQGLPSVYT 344

  Fly   253 SVAYYHDWIEQMM 265
            .|..|.||||.::
  Fly   345 KVHLYTDWIESIV 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 73/269 (27%)
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 74/270 (27%)

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