DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG4927

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster


Alignment Length:635 Identity:114/635 - (17%)
Similarity:177/635 - (27%) Gaps:255/635 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SDVFGGSFMLQRLSVESRSPGWAQVKDLRQTRITCSETNRTLMFKQLSWHLLRIEASAKTSKNEQ 202
            |:...||:.|        |.|......|.|.:.:.:..|.....||..    .:.:..:....:|
  Fly    17 SNTTSGSYQL--------SQGNGNETLLHQPKASTTTGNSNSAAKQQQ----SLYSKQQPQPQQQ 69

  Fly   203 RSKINAPLRLITSGGKIRIALKKNVNDGSVIHARIQTILDDILWVATLPQLRSAIS--------- 258
            :.::......:.||..    |..||                   ||:.|...||.:         
  Fly    70 QKQLQQSTASVASGPN----LPPNV-------------------VASYPSSSSAAATSAGLWSED 111

  Fly   259 --FASYIAKLVKESQKNDVITTSSGNDNPFMKAAGNSATADASTISSAY---------------- 305
              |....|...::.|:.....:|..|.|..:.......||...|.::|.                
  Fly   112 NPFVVSSATAQQQQQQQQPPHSSGVNVNVTVNVVARPVTASTMTTTTATTTSTTTLAPPRPMQKV 176

  Fly   306 --NIFYFDQTSYHLHVKKIDLHLCDDAHTASDYPPDWDIESGAM---QVTLYQVL----IDVYPK 361
              .:.|.        :.:|.:|:              :||..|.   ||.|...|    :.:..|
  Fly   177 IPTVVYL--------MSRIAVHM--------------EIEGTAQCPAQVMLAAALGCEELGITNK 219

  Fly   362 AHAQSDRSTWMRYSNTNPI---------------AAWFR---NHLSEQFLTLLGNAEGQTTRTRL 408
            ..|||....||    |:|:               .||.:   .|.....|..|.: |..||..| 
  Fly   220 LLAQSVFGLWM----TSPLLEVQLKPHHRPYAVRVAWSKLLDKHSHGNELEKLSD-EPMTTLRR- 278

  Fly   409 ERCWPQLIGFFVVLRVHDLTIQCVSDMNTKKD--ALTNLFESERHLHSLPSDQQIVHVEFGAFYH 471
                    ..|...|          |....||  .|..|:|..||           :|..|.:..
  Fly   279 --------NVFFSRR----------DEEKIKDPRILELLYEEARH-----------NVLLGRYVM 314

  Fly   472 PHSDKLPVPNSAVYFQLGPFTISFDERTMRWCCYVAHALSSAIEDGNLIPENELDIQPPTIKVNL 536
            ..|..:.:.......:|||...|      |:.|.|..             ||:....|..:..: 
  Fly   315 EPSQSIMLGGIQARIELGPLFQS------RFVCLVCR-------------ENQFRFLPAHVAKS- 359

  Fly   537 VMPRLVLNLPGPFTDFNFPRRLVTSMSTLSI---SSSQIDFKENSRFRILSESTDE--------- 589
                                   :|.|.|.|   ||:::...|..: |:.:.:|.:         
  Fly   360 -----------------------SSWSWLPISQRSSAEVRLLEQFK-RVPTTATTKKLMRKYLEF 400

  Fly   590 ------------HSDVKNQLINGLNKFHICTSPVWIEIDHGPQTKGFPFLHDVSFNGILAIDKDK 642
                        |..|: |.:.||...              .|.|..|.|..|:..||..||:.:
  Fly   401 CWGLPFYGAAYFHGQVE-QPVRGLMSL--------------MQQKDLPVLIAVNERGIFVIDQIE 450

  Fly   643 VNVLVEPAEDVAVVVDHYQFLQLTRLGDKFTKFLDQLTLDMKHYNTNKPK 692
            ..:|                     ||.|:.:|..:..   |..|.|.|:
  Fly   451 CTLL---------------------LGLKYEEFSWEYA---KPSNVNDPE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 23/135 (17%)
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 60/328 (18%)

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