DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss4

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:241 Identity:84/241 - (34%)
Similarity:119/241 - (49%) Gaps:33/241 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRP 104
            |||:|||::.....|:||||... .:|||||||:...||||||||..   :||.:.:..|   |.
  Rat   244 TRVVGGVEASADSWPWQVSIQYN-KQHVCGGSILDHHWILTAAHCFR---KYLDVSSWKV---RA 301

  Fly   105 GAEYLVDG-----SKIHCSHDKPAY--HNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLT 162
            |:..|.:.     :||..:...|..  ..||||:....|:.:....:||      .||...::|.
  Rat   302 GSNKLGNSPSLPVAKIFIAEPNPLQPKEKDIALVKLKMPLTFSGSVRPI------CLPFSDEELI 360

  Fly   163 LT------GWGST-KTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFT-QEGEGSCH 219
            .|      |||.| :..|:.|..|.:..:..||...|.:.......::.|.:|..| |.|:.:|.
  Rat   361 PTMPVWVIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQGEVTAGMLCAGTPQGGKDTCQ 425

  Fly   220 GDSGGPLV---DANQTLVGVVNWGEAC-AIGYPDVFGSVAYYHDWI 261
            |||||||:   |..| :||:|:||..| :...|.|:..|..|.|||
  Rat   426 GDSGGPLMYHYDKWQ-VVGIVSWGYGCGSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 82/239 (34%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 81/238 (34%)
Blue background indicates that the domain is not in the aligned region.

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