DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:253 Identity:82/253 - (32%)
Similarity:122/253 - (48%) Gaps:31/253 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GHVKPET----RVIGGVD-SPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCM----EWPI 89
            |:..|.|    |::||:: ||..| |: ::::...|:..||||:|....|||||||:    .|.:
  Fly   388 GNKNPVTPDQERIVGGINASPHEF-PW-IAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDV 450

  Fly    90 QYLKIVTGTVDYTRPGAEYLVD--GSKI-----HCSHDKPAYHNDIALIHTAKPIVYDDLTQPIK 147
            ..|....|  || ..|.::.|.  ..:|     |...:....|||:|::..::|:.:....|||.
  Fly   451 AALTAHLG--DY-NIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPIC 512

  Fly   148 L---ASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNA--NWLSEGHV 207
            |   .|:.|....|...|:.||||.:..|...:.|||:|:....:..|..:...|  ..:.|..:
  Fly   513 LPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGIIESMI 577

  Fly   208 CTFTQEGEGSCHGDSGGPLV---DANQTLVGVVNWGEACAIG-YPDVFGSVAYYHDWI 261
            |. .|..:.||.||||||:|   ....|.||:|:||..|..| ||.|:..|.....||
  Fly   578 CA-GQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 78/241 (32%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 78/241 (32%)
Blue background indicates that the domain is not in the aligned region.

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