DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Jon25Bii

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001285608.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster


Alignment Length:298 Identity:83/298 - (27%)
Similarity:124/298 - (41%) Gaps:73/298 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKP---------------ETRVIGGVDSPTGFAP 54
            :.::||.:...|:|...:            .|||               |.|:..|..:..|..|
  Fly     3 LFLTVLAVAIACAAAQPE------------KVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVP 55

  Fly    55 YQVSI--MNTFGEHVCGGSIIAPQWILTAAHCME------------WPIQYLKIVTGTVDYTRP- 104
            |.|.:  .:..|...||||||...|::|||||..            |.:|        ..||.. 
  Fly    56 YIVGLGFSSDSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRLQ--------AQYTHTV 112

  Fly   105 GAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKL-TLTGWGS 168
            |:.:.    :.|..::....:|||:||:|.....:       .|.:|..||...::. :..||.:
  Fly   113 GSGHF----RQHSDYNTNNLNNDISLINTPHVDFW-------HLINKVELPDGNERHDSFAGWWA 166

  Fly   169 TKT-WGR------YSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPL 226
            ..: |||      .|..|..:|...|..|.|.| |...:.:::..:||.|..|:.:|.|||||||
  Fly   167 LASGWGRPCDSCGVSDYLNCVDSQIITRDECSS-VYGTDVITDNVICTSTPGGKSTCAGDSGGPL 230

  Fly   227 VDANQT-LVGVVNW--GEACAIGYPDVFGSVAYYHDWI 261
            |..::: ||||.::  ...|..|.||.|..|..|.|||
  Fly   231 VLHDRSKLVGVTSFVAASGCTSGLPDGFTRVTSYLDWI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 73/245 (30%)
Tryp_SPc 42..263 CDD:238113 74/246 (30%)
Jon25BiiNP_001285608.1 Tryp_SPc 42..268 CDD:214473 73/245 (30%)
Tryp_SPc 43..271 CDD:238113 74/246 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436766
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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