DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Jon25Biii

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:280 Identity:87/280 - (31%)
Similarity:120/280 - (42%) Gaps:49/280 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKCLVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGE 65
            ||..:.|..|.:.| .||...|:..:....    ..|.|.|:..|..:|.|.|||.|. :...|.
  Fly     1 MKVFLAILALAVAS-ASAFDEKVFVKDLPK----ATKIEGRITNGYAAPEGKAPYTVG-LGFSGG 59

  Fly    66 HVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGAEY---LVDGSKIHCSHDKPAYHND 127
            ..|||||||..|:|||.||:......:.....|   .|..|::   :.:|:.|..|      :.|
  Fly    60 WWCGGSIIAHDWVLTAEHCIGDAASVIVYFGAT---WRTNAQFTHTVGNGNFIKHS------NAD 115

  Fly   128 IALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK--------LTLTGWGSTKTWGRYSTQLQKIDL 184
            ||||.    |.:.|...   :.:|..||...|:        ....|||.|.........||.:||
  Fly   116 IALIR----IPHVDFWH---MVNKVELPSYNDRYNNYNEWWAVACGWGGTYDGSPLPDWLQCVDL 173

  Fly   185 NYIDHDNCQSRVRNANW----LSEGHVCTFTQEGEGSCHGDSGGPLV--DANQTLVGVVNW--GE 241
            ..:.::.|       .|    :.:..:||.|.:|:..|.||||||||  |.:: ||||.|:  ..
  Fly   174 QIVHNEEC-------GWTYGSVGDNVICTRTVDGKSICGGDSGGPLVTHDGSK-LVGVSNFVSSN 230

  Fly   242 ACAIGYPDVFGSVAYYHDWI 261
            .|..|.|..|..|.|:.|||
  Fly   231 GCQSGAPAGFQRVTYHLDWI 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 75/238 (32%)
Tryp_SPc 42..263 CDD:238113 76/239 (32%)
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 75/238 (32%)
Tryp_SPc 37..253 CDD:238113 76/239 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436784
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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