DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG3355

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_608848.1 Gene:CG3355 / 33667 FlyBaseID:FBgn0031619 Length:314 Species:Drosophila melanogaster


Alignment Length:279 Identity:81/279 - (29%)
Similarity:130/279 - (46%) Gaps:44/279 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SQCSAKSVKIHRRHQLNHHLGHVKPE-TRVIGGVDSPTGFAPYQVSIMNTFGEH----VCGGSII 73
            :||:||.         |...|  .|. .|::||....:...|:...::.  |.|    .||||:|
  Fly    58 NQCTAKQ---------NCFCG--TPNVNRIVGGQQVRSNKYPWTAQLVK--GRHYPRLFCGGSLI 109

  Fly    74 APQWILTAAHCM-----EWPIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHT 133
            ..:::||||||:     :..|:.|:|...:.|   ||....|..:.:|.::|.....||:||:..
  Fly   110 NDRYVLTAAHCVHGNRDQITIRLLQIDRSSRD---PGIVRKVVQTTVHPNYDPNRIVNDVALLKL 171

  Fly   134 AKPIVYDDLTQPIKLASKGSLPKV-----GDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQ 193
            ..|:......:|:      .||:.     |....:.|||..|..|..|..||::::..|.:..|:
  Fly   172 ESPVPLTGNMRPV------CLPEANHNFDGKTAVVAGWGLIKEGGVTSNYLQEVNVPVITNAQCR 230

  Fly   194 SRVRNANWLSEGHVCT--FTQEGEGSCHGDSGGPLV--DANQTLVGVVNWGEACA-IGYPDVFGS 253
             :.|..:.::|..:|.  ..|.|:.:|.|||||||:  :....|.|||::|..|| ...|.|:..
  Fly   231 -QTRYKDKIAEVMLCAGLVQQGGKDACQGDSGGPLIVNEGRYKLAGVVSFGYGCAQKNAPGVYAR 294

  Fly   254 VAYYHDWIEQMMTDAGTAC 272
            |:.:.|||.:...| |..|
  Fly   295 VSKFLDWIRKNTAD-GCYC 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 70/239 (29%)
CG3355NP_608848.1 Tryp_SPc 76..305 CDD:238113 70/240 (29%)

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