DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG4271

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_608665.1 Gene:CG4271 / 33410 FlyBaseID:FBgn0031409 Length:242 Species:Drosophila melanogaster


Alignment Length:235 Identity:68/235 - (28%)
Similarity:114/235 - (48%) Gaps:33/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCME-WPIQYLKIVTGTVDYTRPG 105
            :..||::...|..:..|:. ..|.|.|||::|..:.:||||.|:: .|::.:.:..||.|..|.|
  Fly    19 IYNGVEAKFDFWTFLASVW-VSGYHECGGAVIDSRIVLTAAQCVKNKPVKRITVRVGTPDIYRGG 82

  Fly   106 AEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTK 170
            ....|....:|.::..  :.|||||:...||::...:|: |.||:|.  |...:..:..|||   
  Fly    83 RIIRVTALVVHENYKN--WDNDIALLWLEKPVLSVRVTK-IPLATKE--PSENEYPSNAGWG--- 139

  Fly   171 TWGRYSTQLQKIDLNYI---DHDNCQSRVRNANWLSEGHV--------CTFTQEGEGSCHGDSGG 224
                     :|:..:|:   ...|..:::|..:..:|..|        |.|..|.: .|.||.||
  Fly   140 ---------EKLLESYVVTRKLQNGVTKIRPRSMCAEELVEPVGEELLCAFYTEND-ICPGDYGG 194

  Fly   225 PLVDANQTLVGVVNWGEACAIG-YPDVFGSVAYYHDWIEQ 263
            |||.||: :||:...|..|... .|.::.:|.:|.:|||:
  Fly   195 PLVLANK-VVGIAVQGHGCGFAVLPSLYTNVFHYLEWIEE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 67/233 (29%)
CG4271NP_608665.1 Tryp_SPc 19..234 CDD:238113 68/235 (29%)

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