DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Ser12

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster


Alignment Length:268 Identity:79/268 - (29%)
Similarity:131/268 - (48%) Gaps:35/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVC 68
            |||::.:.::|..|:                   || |::||........|:|.::|.: .:::|
  Fly     6 LVLVASVTLISAGSS-------------------PE-RIVGGHPVLISEVPWQAALMYS-EKYIC 49

  Fly    69 GGSIIAPQWILTAAHCMEWPIQYL-KIVTGTVDYTRPGAEYLVDGSKIHCSH-DKPAYHNDIALI 131
            |..|.:.:.|:|||||:|.|...| .:..|:|.....|....|...:.|..: ......||||:|
  Fly    50 GAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKNLGGQHARVAVIRKHEDYVSSTILFNDIAVI 114

  Fly   132 HTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRV 196
            .....::::...:||:||.  |.|..|.:.:::|||.........|.|.|..:..:|.:.|:   
  Fly   115 RLVDTLIFNAEVRPIQLAD--SAPAAGTEASVSGWGEIGILWLQPTSLLKTSVKILDPNVCK--- 174

  Fly   197 RNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDANQTLVGVVNWGEACAIG-YPDVFGSVAYYHDW 260
            |:..::::..:|..... :.|||||||||||...| |||:|::|..||.. :|.|:.:||....|
  Fly   175 RSYQYITKTMICAAALL-KDSCHGDSGGPLVSGGQ-LVGIVSYGIGCANPFFPGVYANVAELKPW 237

  Fly   261 ----IEQM 264
                |||:
  Fly   238 ILNAIEQL 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/227 (30%)
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 68/222 (31%)

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