DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and Ser6

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster


Alignment Length:234 Identity:80/234 - (34%)
Similarity:116/234 - (49%) Gaps:20/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCME--------WPI--QYLKIV 95
            ||:||.|:.....|:|||:.|. |.|.|||||:...:|||||||:.        .||  :...|.
  Fly    31 RVVGGEDAVKNQFPHQVSLRNA-GSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIR 94

  Fly    96 TGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK 160
            .|:.|....|.  ||..:::....:...:.||:||:....|::.....|||.|.:..:...|  .
  Fly    95 AGSNDRFSGGV--LVQVAEVIVHEEYGNFLNDVALLRLESPLILSASIQPIDLPTVDTPADV--D 155

  Fly   161 LTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGP 225
            :.::|||..|..|.....||...|..|....|:..:   ::..||.:|...|...|:|:||||||
  Fly   156 VVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELI---DFGFEGELCLLHQVDNGACNGDSGGP 217

  Fly   226 LVDANQTLVGVVNW-GEACAIGYPDVFGSVAYYHDWIEQ 263
            .|..|| ||||..: .:.|...|||.:..|.|:.|||::
  Fly   218 AVYNNQ-LVGVAGFVVDGCGSTYPDGYARVFYFKDWIKK 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 78/230 (34%)
Tryp_SPc 42..263 CDD:238113 79/231 (34%)
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 78/230 (34%)
Tryp_SPc 32..256 CDD:238113 79/233 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.