DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and LOC3291694

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_555167.2 Gene:LOC3291694 / 3291694 VectorBaseID:AGAMI1_013239 Length:277 Species:Anopheles gambiae


Alignment Length:277 Identity:89/277 - (32%)
Similarity:140/277 - (50%) Gaps:27/277 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVLISVLVILSQCSAKSVKIHRRHQLNHHL-------------GHVKPETRVIGGVDSPTGFAPY 55
            ::|::|||.:..|:  ..:...||.|.|.|             ||     ||:||.......|||
Mosquito     7 ILLLAVLVAVVACA--QAQPSGRHHLVHPLLPRFLPRLHRGSNGH-----RVVGGFQIDVSDAPY 64

  Fly    56 QVSIMNTFGEHVCGGSIIAPQWILTAAHCMEW--PIQYLKIVTGTVDYTRPGAEYLVDGSKIHCS 118
            ||| :..|..|.||||::..:|:||||||.:.  | ..|.:..|:.::...|....|..:..|..
Mosquito    65 QVS-LQYFNSHRCGGSVLDNKWVLTAAHCTQGLDP-SSLAVRLGSSEHATGGTLVGVLRTVEHPQ 127

  Fly   119 HDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKID 183
            :|......|.:|:.....:.:.|:.||::|.......:.|...|::|||:|::....|..|:..:
Mosquito   128 YDGNTIDYDFSLMELETELTFSDMVQPVELPEHEEPVEPGTMATVSGWGNTQSAVESSDFLRAAN 192

  Fly   184 LNYIDHDNCQSRVRNANWLSEGHVCT-FTQEGEGSCHGDSGGPLVDANQTLVGVVNWGEACA-IG 246
            :..:.|::|.........:::..:|. :.|.|:.:|.|||||||| |:..|||||:||..|| .|
Mosquito   193 VPTVSHEDCSDAYMWFGEITDRMLCAGYQQGGKDACQGDSGGPLV-ADGKLVGVVSWGYGCAQPG 256

  Fly   247 YPDVFGSVAYYHDWIEQ 263
            ||.|:|.||...||:.:
Mosquito   257 YPGVYGRVASVRDWVRE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 76/224 (34%)
LOC3291694XP_555167.2 None

Return to query results.
Submit another query.