DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG6048

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster


Alignment Length:261 Identity:86/261 - (32%)
Similarity:126/261 - (48%) Gaps:45/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGE-------HVCGGSIIAPQWILTAAHCMEWPIQY------- 91
            |:|.|.::..|...:||.|.....:       |:||||:|.|.|:||||||....|.|       
  Fly    45 RIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCFVDQIIYDGTFVPK 109

  Fly    92 --LKIVTGTVD-YTRPGA------EYLVDGSKIHCSHDKPAYHNDIAL------IHTAKPIVYDD 141
              ..:|.|.:| |.|...      |.::...|.    |...|..||||      :.|..|.:   
  Fly   110 EEFIVVMGNLDRYNRTNTLTFTIEERIMQLDKF----DLSTYDKDIALLMLNGTVPTGHPTI--- 167

  Fly   142 LTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGH 206
              :||.| ::.::|: |....:||||:|:. |..|..|..:|:..|..::|.:.....:.:..|.
  Fly   168 --RPIAL-NRFAIPE-GVVCQVTGWGNTED-GYVSDILMTVDVPMISEEHCINDSDLGHLIQPGM 227

  Fly   207 VCT-FTQEGE-GSCHGDSGGPLVDANQTLVGVVNWGEACAI-GYPDVFGSVAYYHDWIEQMMTDA 268
            :|. :.:.|| .:|.|||||||| ....|.|||:||..||: ..|.|:..|:||:|||.|.|.:.
  Fly   228 ICAGYLEVGEKDACAGDSGGPLV-CQSELAGVVSWGIQCALPRLPGVYTEVSYYYDWILQNMGEN 291

  Fly   269 G 269
            |
  Fly   292 G 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 82/252 (33%)
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 81/251 (32%)

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