DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LOC312273

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001101326.1 Gene:LOC312273 / 312273 RGDID:1563848 Length:246 Species:Rattus norvegicus


Alignment Length:237 Identity:79/237 - (33%)
Similarity:115/237 - (48%) Gaps:21/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVD-YT 102
            :.|::||........|||||:  ..|.|:||||:|..||:|:||||..   ..|::..|..: |.
  Rat    22 DDRIVGGYTCQEHSVPYQVSL--NAGSHICGGSLITDQWVLSAAHCYH---PQLQVRLGEHNIYE 81

  Fly   103 RPGAEYLVDGSK--IHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTG 165
            ..|||..:|.:|  :|..:||....|||.||....|...:.....|.|..  ..|..|.:..::|
  Rat    82 IEGAEQFIDAAKMILHPDYDKWTVDNDIMLIKLKSPATLNSKVSTIPLPQ--YCPTAGTECLVSG 144

  Fly   166 WGSTKTWGRYSTQLQKIDLNYIDHDNCQS----RVRNANWLSEGHVCTFTQEGEGSCHGDSGGPL 226
            ||..|......:.||.:|...:....|..    ::.| |....|    |.:.|:.||..|||||:
  Rat   145 WGVLKFGFESPSVLQCLDAPVLSDSVCHKAYPRQITN-NMFCLG----FLEGGKDSCQYDSGGPV 204

  Fly   227 VDANQTLVGVVNWGEACAI-GYPDVFGSVAYYHDWIEQMMTD 267
            | .|..:.|:|:||:.||: |.|.|:..|..|.:||.|.:.:
  Rat   205 V-CNGEVQGIVSWGDGCALEGKPGVYTKVCNYLNWIHQTIAE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 76/227 (33%)
Tryp_SPc 42..263 CDD:238113 77/228 (34%)
LOC312273NP_001101326.1 Tryp_SPc 25..242 CDD:238113 77/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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