DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss3

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:277 Identity:90/277 - (32%)
Similarity:133/277 - (48%) Gaps:38/277 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGG-VDSPTGFAPYQVSIMNTFGEHVCGGSIIA 74
            |:..:|||..::          .|:   ..|::|| |.|.|.: |:|||:... |.|:||||:|.
  Rat   199 VVTLKCSACGMR----------TGY---SPRIVGGNVSSLTQW-PWQVSLQFQ-GYHLCGGSVIT 248

  Fly    75 PQWILTAAHCM-------EWPIQYLKIVTGTVD-YTRPGAEYLVDGSKIHCSHDKPAYHNDIALI 131
            |.||:|||||:       .|.:|     .|.|. ...|...:||:....|..:......|||||:
  Rat   249 PLWIVTAAHCVYDLYHPKSWTVQ-----VGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALM 308

  Fly   132 HTAKPIVYDDLTQPIKLA-SKGSLPKVGDKLTLTGWGSTKTW-GRYSTQLQKIDLNYIDHDNCQS 194
            ..::|:.:|:..|||.|. |:.:.|. |.....:|||:|:.. |..|..|....:..|.:..|..
  Rat   309 KLSEPLTFDETIQPICLPNSEENFPD-GKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNH 372

  Fly   195 RVRNANWLSEGHVCT-FTQEGEGSCHGDSGGPLVDANQ---TLVGVVNWGEACA-IGYPDVFGSV 254
            |......:|...:|. :.:.|..||.||||||||...:   .|||..::|..|| :..|.|:..:
  Rat   373 RDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRI 437

  Fly   255 AYYHDWI-EQMMTDAGT 270
            ..:.||| ||:..|..|
  Rat   438 TSFLDWIHEQLERDLKT 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 80/237 (34%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 4/21 (19%)
Tryp_SPc 216..444 CDD:214473 79/235 (34%)
Blue background indicates that the domain is not in the aligned region.

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