DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss11e

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001406557.1 Gene:Tmprss11e / 305265 RGDID:1561698 Length:423 Species:Rattus norvegicus


Alignment Length:277 Identity:76/277 - (27%)
Similarity:132/277 - (47%) Gaps:50/277 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KSVKIHRRHQ------LNHHLG------HVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGS 71
            :||:|.:.::      |||..|      ..:...|::||..:..|..|:| |.:...|.|.||.:
  Rat   157 ESVEIKKINKTESDNYLNHCCGTRRNKSTAQTSVRIVGGTSAEEGEWPWQ-SSLQWDGSHRCGAT 220

  Fly    72 IIAPQWILTAAHCM-------EW------PIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPA 123
            :|:..|:::||||.       .|      .:|..|:.||            :....:|..::.|:
  Rat   221 LISNTWLVSAAHCFRTHKDPSRWTASFGATLQPPKLTTG------------IRRIIVHEKYNYPS 273

  Fly   124 YHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYID 188
            :..||||:..::|:...:....:.|.......:.|.::.:||:|:.:..|.....|:::.::|||
  Rat   274 HDYDIALVELSRPVPCTNAVHKVCLPDANHEFQPGQRMFVTGFGALRNDGFAQNYLRQVQVDYID 338

  Fly   189 HDNCQSRVRNANW-LSEGHVCTFTQEGE-GSCHGDSGGPLV--DANQT--LVGVVNWGEACAIGY 247
            ...| :|.::.|. ::...:|....:|| .:|.||||||||  |....  |.|||:||:.|  |.
  Rat   339 TQTC-NRPQSYNGAITPRMLCAGFLKGEKDACQGDSGGPLVTPDVRDVWYLAGVVSWGDEC--GQ 400

  Fly   248 PD---VFGSVAYYHDWI 261
            |:   |:..|..:.|||
  Rat   401 PNKPGVYTRVTAFRDWI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 68/242 (28%)
Tmprss11eNP_001406557.1 SEA 50..146 CDD:460188
Tryp_SPc 192..420 CDD:238113 68/242 (28%)
Blue background indicates that the domain is not in the aligned region.

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