DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Klk1c3

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001258244.1 Gene:Klk1c3 / 292872 RGDID:735032 Length:255 Species:Rattus norvegicus


Alignment Length:242 Identity:70/242 - (28%)
Similarity:120/242 - (49%) Gaps:27/242 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTR 103
            ::||:||........|:||:::|   |.:|||.:|.|.|::|||||..   ....::.|..:.:.
  Rat    22 QSRVVGGFKCEKNSQPWQVAVIN---EDLCGGVLIDPSWVITAAHCYS---DNYHVLLGQNNLSE 80

  Fly   104 PGAEYLVDGSKIHCSHD---------KPA-YHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVG 158
            .....||..|..|..:.         ||. |.||:.|:|.::|....|..:.|.|.:|.  ||||
  Rat    81 DVQHRLVSQSFRHPDYKPFLMRNHTRKPKDYSNDLMLLHLSEPADITDGVKVIDLPTKE--PKVG 143

  Fly   159 DKLTLTGWGST--KTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQE-GEGSCHG 220
            ....::|||||  ..| .:...||.::::.:.::.|....:..  :::..:|....| |:.:|.|
  Rat   144 STCLVSGWGSTNPSEW-EFPDDLQCVNIHLLSNEKCIKAYKEK--VTDLMLCAGELEGGKDTCRG 205

  Fly   221 DSGGPLVDANQTLVGVVNWGEA-CA-IGYPDVFGSVAYYHDWIEQMM 265
            ||||||: .:..|.|:.:||.. |. ...|.::..:..:..||:::|
  Rat   206 DSGGPLI-CDGVLQGITSWGSVPCGEPNKPGIYTKLIKFTSWIKEVM 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 67/234 (29%)
Tryp_SPc 42..263 CDD:238113 68/235 (29%)
Klk1c3NP_001258244.1 Tryp_SPc 24..247 CDD:214473 67/234 (29%)
Tryp_SPc 25..250 CDD:238113 68/236 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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