DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Habp2

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001001505.2 Gene:Habp2 / 292126 RGDID:1302979 Length:558 Species:Rattus norvegicus


Alignment Length:257 Identity:81/257 - (31%)
Similarity:121/257 - (47%) Gaps:38/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTF-------GEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGT 98
            |:.||..|..|..|:|||:..:.       ..|.||||:|.|.|:||||||.:...::||:|.|.
  Rat   311 RIYGGFKSTAGKHPWQVSLQTSLPLTTSMPQGHFCGGSLIHPCWVLTAAHCTDMSTKHLKVVLGD 375

  Fly    99 VDYTRPGA-------EYLVDGSKIHCSHDKPAYHNDIALI-------HTAKPIVYDDLTQPIKLA 149
            .|..:..:       |.::..|:.:...:.|  ||||||:       |.|....|      :|..
  Rat   376 QDLKKTESHEQTFRVEKILKYSQYNERDEIP--HNDIALLKLKPVGGHCALESKY------VKTV 432

  Fly   150 SKGSLP-KVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVC--TFT 211
            ...|.| ..|.:..::|||.|:| |..|.||....:..|.:..|.||....:.:.:..:|  ...
  Rat   433 CLPSDPFPSGTECHISGWGVTET-GEGSRQLLDAKVKLIANALCNSRQLYDHTIDDSMICAGNLQ 496

  Fly   212 QEGEGSCHGDSGGPLV---DANQTLVGVVNWGEACAIGYPDVFGSVAYYHDWIEQMM-TDAG 269
            :.|..:|.|||||||.   |....:.|:|:||:.|. ..|.|:..|..:.:||:..| .:||
  Rat   497 KPGSDTCQGDSGGPLTCEKDGTYYVYGIVSWGQECG-KKPGVYTQVTKFLNWIKTTMHKEAG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 77/247 (31%)
Habp2NP_001001505.2 EGF_CA 71..107 CDD:238011
KR 191..275 CDD:238056
Tryp_SPc 312..551 CDD:238113 77/248 (31%)
Blue background indicates that the domain is not in the aligned region.

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