DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:251 Identity:76/251 - (30%)
Similarity:127/251 - (50%) Gaps:21/251 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HQLNHH--LGHVKPE-TRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWP 88
            |.||.:  ||...|. .|:..|..:.:...|:| |.:...|.|:||.|:|..||::|:|||.:  
  Rat   168 HILNSNCGLGMEYPRIARIADGKPAGSNSWPWQ-SSLQVEGIHLCGASLIGSQWLVTSAHCFD-- 229

  Fly    89 IQYLKIVTGTVDYTR----PGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKL- 148
             .|......||.:.|    |.....|:...||.::....:.:|||::..:.|:::.:..:.:.| 
  Rat   230 -NYKNPKLWTVSFGRTLGNPLTTRKVESIIIHENYAAHKHDDDIAVVKLSSPVLFSENLRTVCLP 293

  Fly   149 -ASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQ 212
             |:...|||  .|:.:||||:.|..|.:...||::::..|.:|.|.........:|.|.:|....
  Rat   294 EATFQVLPK--SKVFVTGWGALKANGPFPNSLQEVEIEIISNDVCNQVNVYGGAISSGMICAGFL 356

  Fly   213 EGE-GSCHGDSGGPLVDANQT----LVGVVNWGEACA-IGYPDVFGSVAYYHDWIE 262
            .|: .:|.||||||||.::..    |:|:|:||..|. ...|.::..|.:|.:||:
  Rat   357 TGKLDACEGDSGGPLVISDNRNKWYLLGIVSWGIDCGKENKPGIYTRVTHYRNWIK 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/233 (30%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 68/231 (29%)
Blue background indicates that the domain is not in the aligned region.

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