DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Proc

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_008770240.3 Gene:Proc / 25268 RGDID:3411 Length:500 Species:Rattus norvegicus


Alignment Length:237 Identity:70/237 - (29%)
Similarity:110/237 - (46%) Gaps:19/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPG 105
            |::.|..:..|.:|:|..::::..:..|||.:|...|:||||||:| ..:.|.:..|..|..|..
  Rat   251 RIVNGTLTKQGDSPWQAILLDSKKKLACGGVLIHTSWVLTAAHCLE-SSKKLTVRLGEYDLRRRD 314

  Fly   106 AEYL---VDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKG---SLPKVGDKLTLT 164
            ...|   :....:|.::.:....|||||:..::|........||.|.:.|   .|.:.|.:..:|
  Rat   315 PWELDLDIKEVLVHPNYTRSNSDNDIALLRLSQPATLSKTIVPICLPNSGLAQELSQAGQETVVT 379

  Fly   165 GWG----STKTWGRYST-QLQKIDLNYIDHDNCQSRVRNANWLSEGHVCT-FTQEGEGSCHGDSG 223
            |||    ..|...|..| .|..|.:.....::|...:.|.  :||..:|. ...:...:|.||||
  Rat   380 GWGYQSDKVKDGRRNRTFILTFIRIPLAARNDCMQVMNNV--VSENMLCAGIIGDTRDACDGDSG 442

  Fly   224 GPLV---DANQTLVGVVNWGEACA-IGYPDVFGSVAYYHDWI 261
            ||:|   .....|||:|:|||.|. :....|:..|..|..||
  Rat   443 GPMVVFFRGTWFLVGLVSWGEGCGHLNNYGVYTKVGSYLKWI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/236 (29%)
ProcXP_008770240.3 GLA 65..125 CDD:214503
EGF_CA 126..170 CDD:238011
FXa_inhibition 178..213 CDD:464251
Tryp_SPc 252..486 CDD:238113 69/236 (29%)
Blue background indicates that the domain is not in the aligned region.

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