DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Klkb1

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:243 Identity:85/243 - (34%)
Similarity:119/243 - (48%) Gaps:25/243 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPETRVIGGVDSPTGFAPYQVSIMNTF--GEHVCGGSIIAPQWILTAAHCME-------WPIQ-- 90
            |...|::||.:|..|..|:|||:....  ..|:||||||..|||||||||.:       |.|.  
  Rat   386 KINARIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQWILTAAHCFDGIPYPDVWRIYGG 450

  Fly    91 --YLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGS 153
              .|..:|....::  ..:.|:    ||..:.......|||||....|:.|.:..:||.|.||..
  Rat   451 ILNLSEITNKTPFS--SIKELI----IHQKYKMSEGSYDIALIKLQTPLNYTEFQKPICLPSKAD 509

  Fly   154 LPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCT-FTQEGEGS 217
            ...:.....:||||.||..|.....|||..:..:.::.||.:.|: ..:::..:|. :.:.|..:
  Rat   510 TNTIYTNCWVTGWGYTKERGETQNILQKATIPLVPNEECQKKYRD-YVITKQMICAGYKEGGIDA 573

  Fly   218 CHGDSGGPLV---DANQTLVGVVNWGEACA-IGYPDVFGSVAYYHDWI 261
            |.||||||||   .....|||:.:|||.|| ...|.|:..||.|.|||
  Rat   574 CKGDSGGPLVCKHSGRWQLVGITSWGEGCARKEQPGVYTKVAEYIDWI 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 83/238 (35%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 81/236 (34%)
Blue background indicates that the domain is not in the aligned region.

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