DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG30187

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster


Alignment Length:235 Identity:61/235 - (25%)
Similarity:117/235 - (49%) Gaps:21/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHC-MEWPIQYLKIVTGTVDYTRP 104
            ::.||.::....:.:..::.|. ...:|||::|..:::|||||| ::..:|.:.:  |..:.:.|
  Fly    35 KITGGHNAAFQNSVWMAAVHNR-THFICGGTLIHKRFVLTAAHCIVDQDVQSVSL--GAYNKSDP 96

  Fly   105 GAEYLVDGSKIHCSHD-KPAYHNDIALIHTAKPIVYDDLTQPIKLA-SKGSLPKVGDKLTLT--G 165
            .....|..:.:|.|.| :.:|.|||.|:..:..::::.|.:||.:. :|.....:.:..|..  |
  Fly    97 ADRKDVITAVVHSSFDVRASYENDIGLLKLSSDVIFNALIRPICIVLNKSMANHMRNMRTFKAFG 161

  Fly   166 WGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPL---- 226
            || |....:.|..||.|.||::|.:.|...:  :.:.||..:|.....|: :|.|||||||    
  Fly   162 WG-TLRGNKTSDILQTIILNHLDREECYMEL--SVYPSEKQICAGVPSGD-TCGGDSGGPLTNDV 222

  Fly   227 ----VDANQTLVGVVNWGEACAIGYPDVFGSVAYYHDWIE 262
                :...:...|:::.|:....| ..|:..:..:.|||:
  Fly   223 FIQGIGNREVQFGIISVGKTSCDG-QGVYTDLMSFADWIK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 61/234 (26%)
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 59/232 (25%)
Trypsin 316..>384 CDD:459667
Blue background indicates that the domain is not in the aligned region.

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