DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG30088

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:293 Identity:83/293 - (28%)
Similarity:129/293 - (44%) Gaps:55/293 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLVL---ISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFG 64
            ||||   ::...::..|...       ::.|       ..||::.|.::....||:...:..:..
  Fly    17 CLVLQEQVAANFLIPSCGVS-------YESN-------VATRIVRGKEAMLKSAPFMAYLYYSSE 67

  Fly    65 EHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTR-----------PGAEYLVDGSKIHCS 118
            .| |||:||:.::||||||||.   .|||:..|..|.||           |..|:.:..:..:..
  Fly    68 IH-CGGTIISSRYILTAAHCMR---PYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKR 128

  Fly   119 HDKPAYHNDIALIHTAKPIVYDDLTQPIKL-ASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKI 182
            .|: ...|||||:..::.|.::...|||.| .:..:.|.| .:....|||.|:| ...:..||..
  Fly   129 FDR-FLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNV-HEFQAFGWGQTET-NHSANVLQTT 190

  Fly   183 DLNYIDHDNCQSRVR---NANWLSEGHVCTFTQEGEGSCHGDSGGPLVDA-------NQTLVGVV 237
            .|...|:.:|:|.:.   ..|.|..|.      :|..:|.||||||||..       ....:|:|
  Fly   191 VLTRYDNRHCRSVLSMPITINQLCVGF------QGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIV 249

  Fly   238 NWG-EACAIGYPDVFGSVAYYHDWIEQMMTDAG 269
            ::| :.|.  .|.|:..|..|..||..:|...|
  Fly   250 SFGDDKCQ--SPGVYTYVPNYIRWIRYVMQSNG 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 73/243 (30%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 72/242 (30%)

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