DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG30087

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster


Alignment Length:279 Identity:82/279 - (29%)
Similarity:122/279 - (43%) Gaps:38/279 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ILSQCSAKSVKIHRRHQLNHHLG---HVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSII 73
            :::.|..:..:|.....||...|   ..:...||:.|.::....||:.|.:.|....| |||||:
  Fly     9 VIAICLIRQQRIVDAQFLNPLCGVTYESQTAMRVVNGKEAVIRSAPFMVYVTNNSLTH-CGGSIL 72

  Fly    74 APQWILTAAHCMEWPIQYLKIVTGTVDYTRP----------GAEYLVDGSKIHCSHDKPAYHNDI 128
            ..::|||||||: :|...|::....: .|.|          ..||.:..:..|..::...:.|||
  Fly    73 NSRYILTAAHCV-FPNLRLRLGEHNI-RTDPDCQGSNCSPRSEEYGIMKAITHRFYNAANHVNDI 135

  Fly   129 ALIHTAKPIVYDDLTQPI-KLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNC 192
            ||:...:.|.::...||| .|.:..|.|.|....|. |||.||..| :...||..:|...|...|
  Fly   136 ALLKLNRSINFNVHIQPICILLNPASAPSVATYQTF-GWGETKKNG-FPHLLQTAELRAYDAAYC 198

  Fly   193 QSRVR---NANWLSEGHVCTFTQEGEGSCHGDSGGPLVD-------ANQTLVGVVNWGEA-CAIG 246
            .....   |.|.:..||      |...:|.||||||||.       .....:|:|::|.. |.  
  Fly   199 SRSFHAYMNGNQICAGH------EERDTCAGDSGGPLVTRVDFDGVKRYLQLGIVSYGPTDCQ-- 255

  Fly   247 YPDVFGSVAYYHDWIEQMM 265
            .|.|:..|..|.:||.:.|
  Fly   256 SPGVYTYVPNYINWIRRAM 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 75/242 (31%)
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 75/242 (31%)

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