DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and F12

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:258 Identity:72/258 - (27%)
Similarity:115/258 - (44%) Gaps:51/258 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRP 104
            |||:||:.:..|..||..::.  :|...|.||:|||.|:||||||::               .||
Human   371 TRVVGGLVALRGAHPYIAALY--WGHSFCAGSLIAPCWVLTAAHCLQ---------------DRP 418

  Fly   105 GAEYL--------------------VDGSKIHCSHDKPAYHNDIALIHTAKP-----IVYDDLTQ 144
            ..|.|                    |...::|.:....:|.:|:||:...:.     .:.....|
Human   419 APEDLTVVLGQERRNHSCEPCQTLAVRSYRLHEAFSPVSYQHDLALLRLQEDADGSCALLSPYVQ 483

  Fly   145 PIKLASKGSLPKVGDKLTLTGWG-STKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVC 208
            |:.|.|..:.|.......:.||| ..:....|::.||:..:.::..:.|.:...:.:.:..|.:|
Human   484 PVCLPSGAARPSETTLCQVAGWGHQFEGAEEYASFLQEAQVPFLSLERCSAPDVHGSSILPGMLC 548

  Fly   209 T-FTQEGEGSCHGDSGGPLVDANQ------TLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQ 263
            . |.:.|..:|.||||||||..:|      ||.|:::||..|. ...|.|:..||||..||.:
Human   549 AGFLEGGTDACQGDSGGPLVCEDQAAERRLTLQGIISWGSGCGDRNKPGVYTDVAYYLAWIRE 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 70/254 (28%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
Kringle 217..295 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359
Tryp_SPc 373..612 CDD:238113 70/256 (27%)
Blue background indicates that the domain is not in the aligned region.

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