DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and Tpsb2

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_034911.3 Gene:Tpsb2 / 17229 MGIID:96942 Length:276 Species:Mus musculus


Alignment Length:295 Identity:77/295 - (26%)
Similarity:126/295 - (42%) Gaps:53/295 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KCLVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSI---MNTF 63
            :.|:|:..|.:|:     |:........|..:|       ::||.::.....|:|||:   :| :
Mouse     4 RLLLLLWALSLLA-----SLVYSAPRPANQRVG-------IVGGHEASESKWPWQVSLRFKLN-Y 55

  Fly    64 GEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGAEYLVDGSK--------IHCSHD 120
            ..|.||||:|.|||:||||||:...|:..::..     .:...:||..|.:        :|    
Mouse    56 WIHFCGGSLIHPQWVLTAAHCVGPHIKSPQLFR-----VQLREQYLYYGDQLLSLNRIVVH---- 111

  Fly   121 KPAYHN-----DIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYST--Q 178
             |.|:.     |:||:....|:.......||.|.........|....:||||..........  .
Mouse   112 -PHYYTAEGGADVALLELEVPVNVSTHLHPISLPPASETFPPGTSCWVTGWGDIDNDEPLPPPYP 175

  Fly   179 LQKIDLNYIDHDNCQSRVRNANW-------LSEGHVCTFTQEGEGSCHGDSGGPL---VDANQTL 233
            |:::.:..:::..|..:.....:       :.:|.:|......: ||.|||||||   |......
Mouse   176 LKQVKVPIVENSLCDRKYHTGLYTGDDFPIVHDGMLCAGNTRRD-SCQGDSGGPLVCKVKGTWLQ 239

  Fly   234 VGVVNWGEACA-IGYPDVFGSVAYYHDWIEQMMTD 267
            .|||:|||.|| ...|.::..|.||.|||.:.:.:
Mouse   240 AGVVSWGEGCAQPNKPGIYTRVTYYLDWIHRYVPE 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 70/249 (28%)
Tpsb2NP_034911.3 Tryp_SPc 32..270 CDD:238113 70/249 (28%)

Return to query results.
Submit another query.