DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and CG43336

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001247122.1 Gene:CG43336 / 12798414 FlyBaseID:FBgn0263041 Length:279 Species:Drosophila melanogaster


Alignment Length:258 Identity:72/258 - (27%)
Similarity:109/258 - (42%) Gaps:48/258 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 HVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTV 99
            |.....||..|..:....:|:...:.:|.|..:||||:|..:.:||||||.   :...::|....
  Fly    31 HSPSVPRVKNGTVASLTSSPWMAFLHSTDGRFICGGSLITNRLVLTAAHCF---LDRTELVARLG 92

  Fly   100 DYTRPGAEYLVDGSKIHCS--------------HDKP---AYHNDIALIHTAKPIVYDDLTQPIK 147
            :|.|...|...|.   :|:              |..|   ||  |||::...:.:.|.|..:||.
  Fly    93 EYDREEYEMCHDS---YCTYRIEAMVERGFRHRHYNPMTMAY--DIAILRLYRKVQYTDNIRPIC 152

  Fly   148 LASKGSLPKVGDK---LTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVR---NANWLSEGH 206
            :.......|..|.   ||.||||.|::.|. |.:|:.:||.....:.|:....   .||....|:
  Fly   153 IVIDPRWRKYIDSLDPLTGTGWGKTESEGD-SAKLRTVDLARKHPEVCRRYATLSLTANQFCAGN 216

  Fly   207 VCTFTQEGEGSCHGDSGGP---LVDANQT----LVGVVNW-GEACAIGYPDVFGSVAYYHDWI 261
                  |....|:||||||   |:...::    .||:.:: ...|.:  ..||..|..|.|||
  Fly   217 ------ERSNLCNGDSGGPVGALIPYGKSKRFVQVGIASFTNTQCVM--VSVFTDVMSYVDWI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 70/251 (28%)
CG43336NP_001247122.1 Tryp_SPc 37..271 CDD:214473 69/250 (28%)

Return to query results.
Submit another query.