DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG43125

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001247344.1 Gene:CG43125 / 12798281 FlyBaseID:FBgn0262588 Length:258 Species:Drosophila melanogaster


Alignment Length:119 Identity:35/119 - (29%)
Similarity:60/119 - (50%) Gaps:12/119 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VDSPTGFAPYQVSIMNTFGEHV-CGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGA--- 106
            |.||   ||:.|.|......:: |.|::|..:::||||.|:::..: |.:..|.:|.|...:   
  Fly    32 VFSP---APWLVKIRPELSSNITCTGTLINERFVLTAASCIDYQTE-LIVRLGEIDGTLQNSSKL 92

  Fly   107 ---EYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKL-ASKGSLPK 156
               |..|..:.||.|:...::..:|||:.....:||....|||.: .:.|.:||
  Fly    93 QYEEIYVARALIHRSYSSESHQYNIALLRLKTSVVYKKNIQPICIDVNVGKVPK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 35/119 (29%)
Tryp_SPc 42..263 CDD:238113 35/119 (29%)
CG43125NP_001247344.1 Tryp_SPc 37..>137 CDD:304450 28/100 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437389
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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