DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LOC1269964

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_308619.4 Gene:LOC1269964 / 1269964 VectorBaseID:AGAMI1_009772 Length:251 Species:Anopheles gambiae


Alignment Length:268 Identity:103/268 - (38%)
Similarity:149/268 - (55%) Gaps:25/268 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KCLVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPET--RVIGGVDSPTGFAPYQVSIMNTFG 64
            :..||.|||.:.:                   .|.|.:.  |::||.::..|.||||||:...| 
Mosquito     5 RVFVLCSVLCLTA-------------------AHPKQDDSGRIVGGTEAAPGTAPYQVSLQGLF- 49

  Fly    65 EHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIA 129
            .|:|||:||..||:||||||...|.:.::::.||.|....|..|.|:...:|...:||.:|||||
Mosquito    50 SHMCGGTIIDRQWVLTAAHCAILPPKLMQVLAGTNDLRSGGKRYGVEQFFVHSRFNKPPFHNDIA 114

  Fly   130 LIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQS 194
            |:....|:.:.:..|.::. |:..|| |...:..||||...|.|.....||.|:|.|:.::.|:.
Mosquito   115 LVKLKTPLEFGEFVQAVEY-SERQLP-VNATVRATGWGKVSTSGSVPRMLQTINLRYVPYEECKR 177

  Fly   195 RVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDANQTLVGVVNWGEACAIGYPDVFGSVAYYHD 259
            .:.:...:..||:||.|:||||.|:||||||||...: :|||.|:...||.||||.|.||:||||
Mosquito   178 LLEDNPAVDLGHICTLTKEGEGVCNGDSGGPLVYEGK-VVGVANFAVPCAQGYPDGFASVSYYHD 241

  Fly   260 WIEQMMTD 267
            ||...:.:
Mosquito   242 WIRTTLAN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 95/220 (43%)
LOC1269964XP_308619.4 None

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