DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LOC100495541

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_031749237.1 Gene:LOC100495541 / 100495541 XenbaseID:XB-GENE-29082731 Length:659 Species:Xenopus tropicalis


Alignment Length:255 Identity:87/255 - (34%)
Similarity:117/255 - (45%) Gaps:54/255 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEW---PIQYLKI-------- 94
            |::||.|:..|..|:||| ::..|.|:||||:||.|||:|||||.|:   |..| ||        
 Frog   361 RIVGGTDATDGAWPWQVS-LDYHGSHICGGSLIATQWIMTAAHCFEYSKSPSDY-KIRLGAYQLS 423

  Fly    95 ------VTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGS 153
                  :|.|||            |.|..|.:..:.:.|||||....||.|.....||      .
 Frog   424 LISPHEITSTVD------------SIIVNSPNSSSTNTDIALIRLTSPITYTKYILPI------C 470

  Fly   154 LPKVGDKLT------LTGWGSTKTWGR--YSTQLQKIDLNYIDHDNCQSRVRNANWLSE----GH 206
            ||...|..|      :||||:..:...  |...||::....|....|.......:.||.    ..
 Frog   471 LPSTSDGFTEGMECWVTGWGTIASQVNLPYPMTLQQVMTPLISRATCNQMYNTDSLLSVVVPLDQ 535

  Fly   207 VCTFTQEGE-GSCHGDSGGPLVDANQTL---VGVVNWGEACAI-GYPDVFGSVAYYHDWI 261
            :|.....|: .||.||||||||...|.:   :|:|:|||.||: ..|.|:..|..|:.|:
 Frog   536 ICAGYAAGQKDSCQGDSGGPLVCQLQGIWYQIGIVSWGEGCAVRNRPGVYTLVPAYYSWV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 86/254 (34%)
LOC100495541XP_031749237.1 Tryp_SPc 44..283 CDD:238113
Tryp_SPc 362..595 CDD:238113 85/252 (34%)
Blue background indicates that the domain is not in the aligned region.

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