DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and tmprss6

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:245 Identity:81/245 - (33%)
Similarity:115/245 - (46%) Gaps:31/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLK-----IVTGTVD 100
            |::||..:..|..|:|.| :...|||:|||:::|.|||||||||.. |..|..     :..|.|.
 Frog   570 RLVGGTQAQEGEWPWQAS-LQVRGEHICGGTLVADQWILTAAHCFT-PESYASPEVWTVYLGKVR 632

  Fly   101 YTRPGAEYL---VDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDL-------TQPIKLASKGSLP 155
            .:|...:.|   |....||..:|:.::..|:||      ::.|.|       .|||.|.|.....
 Frog   633 LSRSTQKELAFKVIRLVIHPFYDEDSHDYDVAL------VLLDHLVPLTSPHVQPICLPSSTHHF 691

  Fly   156 KVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEG-EGSCH 219
            ..|....:|||||.|..|..|..|||:|:..:..|.|....|..  :|...:|...::| :.:|.
 Frog   692 PTGSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDICTELYRYQ--ISPRMLCAGYRDGSKDACQ 754

  Fly   220 GDSGGPLV----DANQTLVGVVNWGEACAI-GYPDVFGSVAYYHDWIEQM 264
            ||||.|||    .......|:|:||..|.| .|..|:..:.....|||.:
 Frog   755 GDSGSPLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQWIESI 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 79/241 (33%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 80/241 (33%)
Blue background indicates that the domain is not in the aligned region.

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