DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31266 and hpn

DIOPT Version :10

Sequence 1:NP_001138068.1 Gene:CG31266 / 42071 FlyBaseID:FBgn0051266 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:263 Identity:75/263 - (28%)
Similarity:116/263 - (44%) Gaps:47/263 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VPQGRVIGGTTAAEGNWPWIASIQNAY-SYHLCGAIILDETWVLTAASCV--------------- 95
            :|:.|::||..|.:|:|||..|:|  | ..|.||..|:.:.|:::||.|.               
Zfish   159 LPEERIVGGVDARQGSWPWQVSLQ--YDGVHQCGGSIISDRWIISAAHCFPERYRHASRWRVLMG 221

  Fly    96 ----AGLRPLNLLVVTGTVDWWDLYAPYYTVSQIHVHCNFDKPLYHNDIALLQLSSKIEFNDVTK 156
                ..:|...::....||.:...|.|:       |..|.|.  ...|||::.|:..::|.|..:
Zfish   222 SIYNTPIRKNVVIAEVKTVVYHSSYLPF-------VDANIDD--NSRDIAVISLTKPLQFTDYIQ 277

  Fly   157 NITLADIDE-LEEGDKLTFAGWGSSEAMGTYGRYLQEASGTYLPV--DA-CREKLQNQDDVDLGH 217
            .:.|....: |.:|...|..|||:.|..||....||||   ::|:  || |.......:.|....
Zfish   278 PVCLPTYGQRLADGQMGTVTGWGNVEYYGTQANVLQEA---HVPIISDAVCNGPDYYDNQVTTTM 339

  Fly   218 VCVQMD-AGQGACHGDTGGPLI-------DEQQRLVGIGNWGVPCGRG-YPDVYARTAFYHDWIR 273
            .|...: .|..:|.||:|||.:       ..:.||:|:.:||..|... .|.||.|.:.:..||.
Zfish   340 FCAGYEKGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVSWGTGCAMAKKPGVYTRVSRFLPWIS 404

  Fly   274 TTM 276
            |.|
Zfish   405 TAM 407

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG31266NP_001138068.1 Tryp_SPc 52..275 CDD:238113 71/255 (28%)