DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31266 and tmprss4b

DIOPT Version :10

Sequence 1:NP_001138068.1 Gene:CG31266 / 42071 FlyBaseID:FBgn0051266 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_073805980.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:449 Species:Danio rerio


Alignment Length:239 Identity:74/239 - (30%)
Similarity:114/239 - (47%) Gaps:12/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EAVPQGRVIGGTTAAEGNWPWIASIQNAYSYHLCGAIILDETWVLTAASCVAGLRPLNL---LVV 106
            |.|.:.|::||...:..:|||..|:|..:. |:||..:|..:|:::||.|..| |...|   .||
Zfish   212 EVVGEDRIVGGVETSIEHWPWQVSLQFNHR-HMCGGSLLSTSWIISAAHCFTG-RTQELSRWTVV 274

  Fly   107 TGTVDWWDLYAPYYTVSQIHVHCNFDKPLYHNDIALLQLSSKIEFNDVTKNITLADIDELEEGDK 171
            .|.....|:..  .:|..|.:|.::::.....|||:|:|:..::..:....:.|.. .:|...|.
Zfish   275 LGQTKVMDVVG--VSVDMIVIHKDYNRLTNDFDIAMLKLTWPVKTGESILPVCLPP-HQLAIKDM 336

  Fly   172 LTFAGWGSSEAMGTYGRYLQEASGTYLPVDACREKLQNQDDVDLGHVCVQMDAGQ-GACHGDTGG 235
            |...|||..:..|.....||:||...:....|.:.......:....:|.....|. .||.||:||
Zfish   337 LVVTGWGLLKEGGALPTVLQKASVPLVNRSECSKPTIYSSSITPRMLCAGFLQGNVDACQGDSGG 401

  Fly   236 PLI--DEQQRLVGIGNWGVPCGR-GYPDVYARTAFYHDWIRTTM 276
            ||:  ..:.:|:||.:|||.|.| |.|.|||......|||.|.|
Zfish   402 PLVYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQLLDWIYTVM 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31266NP_001138068.1 Tryp_SPc 52..275 CDD:238113 69/229 (30%)
tmprss4bXP_073805980.1 None

Return to query results.
Submit another query.