DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and 2210010C04Rik

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_075822.3 Gene:2210010C04Rik / 67373 MGIID:1914623 Length:247 Species:Mus musculus


Alignment Length:260 Identity:87/260 - (33%)
Similarity:135/260 - (51%) Gaps:28/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLIWLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQW 70
            :||:|..||.::.:.    ||:.   |::||||...:....|||||:.:.:  |.|.|.::|.||
Mouse     3 TLIFLAFLGAAVALP----LDDD---DDKIVGGYTCQRNALPYQVSLNSGY--HFCGGSLINSQW 58

  Fly    71 ILTAGHCALDFSIEDLRIIVGTN--DRLEPGQTLFPDEALV--HCLYDIPYVYNNDIALIHVNES 131
            :::|.||..    ..:::.:|.:  |.||.|:. |.|.|.:  |..|: ...|||||.||.:..:
Mouse    59 VVSAAHCYK----SRIQVRLGEHNIDALEGGEQ-FIDAAKIIRHPNYN-ANTYNNDIMLIKLKTA 117

  Fly   132 IIFNDRTQIVELSREQPPAGSTVTLTGWGAPESS---YPTVQYLQTLNLTIIAHEECRERWDFHD 193
            ...|.|...|.|.|..|.||:...::|||...||   ||::  ||.|:..:::...|..  .:..
Mouse   118 ATLNSRVSTVALPRSCPSAGTRCLVSGWGNTLSSGTNYPSL--LQCLDAPVLSDSSCTS--SYPG 178

  Fly   194 GIDIGHICT-FTREGEGACSGDSGGPLMWEGKLVGLVNWGRACGV-GMPDMYANTVYYQDWIRRT 256
            .|.....|. |...|:.:|.||||||::..|:|.|:|:||..|.. |.|.:|.....|.:||::|
Mouse   179 KITSNMFCLGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGYGCAQRGKPGVYTKVCKYVNWIQQT 243

  Fly   257  256
            Mouse   244  243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 76/227 (33%)
Tryp_SPc 35..256 CDD:238113 78/229 (34%)
2210010C04RikNP_075822.3 Tryp_SPc 24..240 CDD:214473 76/227 (33%)
Tryp_SPc 25..243 CDD:238113 78/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.