DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and CG17239

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:248 Identity:77/248 - (31%)
Similarity:124/248 - (50%) Gaps:18/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILT 73
            |:.|   :..||    :.:...:..|||||........|:|.||..:.:.| |...|.:|..::|
  Fly     5 WIFL---AFSVT----VVSSNWIPERIVGGDLITILSVPWQASILRLGRFH-CGAAIYSEDIVIT 61

  Fly    74 AGHCALDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRT 138
            |.||..|...|.|.:.||::.....||.:.....|:|..||  ..::||||::.:...:......
  Fly    62 AAHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEEYD--QSWSNDIAVMRLQSKLRLGSAV 124

  Fly   139 QIVELSREQPPAGSTVTLTGWGAP--ESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHIC 201
            .::.|:...|.:||..|::||||.  :.:||  ..:.:.::.|:..::||..:......|:  ||
  Fly   125 SVIPLADTPPASGSPATVSGWGAIGFKKNYP--MSILSASVDIVDQDQCRRSYGRKITKDM--IC 185

  Fly   202 TFTREGEGACSGDSGGPLMWEGKLVGLVNWGRACG-VGMPDMYANTVYYQDWI 253
            . ...|:.||||||||||:...||||:|::|:.|. ...|.:|||....:.||
  Fly   186 A-AAPGKDACSGDSGGPLVSGNKLVGIVSFGKECAHPEYPGVYANVAELKPWI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 71/221 (32%)
Tryp_SPc 35..256 CDD:238113 72/222 (32%)
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 71/221 (32%)
Tryp_SPc 24..237 CDD:238113 70/220 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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