DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and LOC560023

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_021325702.2 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:265 Identity:79/265 - (29%)
Similarity:125/265 - (47%) Gaps:31/265 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIWL-LLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQW 70
            |:|: |:|...:          |.....||:||||.......||||:| :.:.|.|.|.::..||
Zfish    25 LLWVFLVLAVMV----------RDAFSQRIIGGQEVVPYSIKYQVSLQ-VDRKHFCGGTLIQPQW 78

  Fly    71 ILTAGHCALDFSIEDLRIIVGT-NDRLEPG--QTLFPDEALVHCLYDIPYVYNNDIALIHVNESI 132
            :|||.||....|:  :::::.. |..:|.|  |.....:...|..|: |..:||||.:|.:....
Zfish    79 VLTAAHCWRPASV--IQVVLSEHNLAVEEGFEQVCTVAKVFSHVAYN-PKTFNNDIMIIKLTAPA 140

  Fly   133 IFNDRTQIVELSREQPP---AGSTVTLTGWGAPE-SSYPTVQYLQTLNLTIIAHEECRERWDFHD 193
            ..|...|...|.....|   .||:.|::|||... .::.....|:.:::.|.:..:....:..:|
Zfish   141 QINAYVQPALLPTADTPELAGGSSCTVSGWGVTRLYNFYLSPILRAVDVEIFSSCQLYYYYRVND 205

  Fly   194 GIDIGHICTFTR-EGEGACSGDSGGPLMWEGKLVGLVNWGRACGVG-MPDMYANTVYYQ---DWI 253
            .:    ||..:| .|:.:|.|||||||:.:|.|.|:|:||..|.:. .|.:|.....|.   |||
Zfish   206 NM----ICAGSRFGGKDSCQGDSGGPLICDGYLEGIVSWGIGCALPYYPGVYTKVRNYNRWIDWI 266

  Fly   254 RRTHS 258
            ..|.|
Zfish   267 ISTES 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 71/232 (31%)
LOC560023XP_021325702.2 None

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