DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and LOC548809

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 XenbaseID:XB-GENE-29098979 Length:334 Species:Xenopus tropicalis


Alignment Length:278 Identity:80/278 - (28%)
Similarity:128/278 - (46%) Gaps:39/278 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIWLLLLGTSIDV----TRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWK-THICSGVIL 66
            :|.|||:..|..|    |...|:....|:.:|||||.:|.:|..|:|:|::  :| :|||.|.::
 Frog    26 IILLLLVSASPTVSQNTTASPRICGSPLVSSRIVGGTDATNGAWPWQISLR--YKGSHICGGSVI 88

  Fly    67 NEQWILTAGHCALDFS--IEDLRIIVGTND-RLEPGQTLFPDEA--LVHCLYDIPYVYNNDIALI 126
            :.|||:||.|| .::|  ..|.::::|... .:.....|....|  :|:..:.|| ....||||:
 Frog    89 SNQWIMTAAHC-FEYSRTPSDYQVLLGAYQLSVASASELLSSVARVIVNPSFTIP-GGPGDIALL 151

  Fly   127 HVNESIIFND--RTQIVELSREQPPAGSTVTLTGWG----APESSYPTVQYLQTLNLTIIAHEEC 185
            .:...:.:.:  ....|..|......|....:||||    |....||  |.||.:...:|:...|
 Frog   152 KLTSPVAYTEYILPVCVPSSASGFYEGMQCWVTGWGNIGSAVTLPYP--QTLQQVMTPLISWSTC 214

  Fly   186 RERWDFHDGIDIG-------HICTFTREGE-GACSGDSGGPL------MWEGKLVGLVNWGRACG 236
            .:.:....||...       .||.....|: .:|.|||||||      :|  ..:|:|:||..|.
 Frog   215 NQMYHVQSGISSNIAIVPKDQICAGYAAGQKDSCQGDSGGPLVCQLQGVW--YQIGIVSWGDGCA 277

  Fly   237 -VGMPDMYANTVYYQDWI 253
             ...|.:|.....::.|:
 Frog   278 QASRPGVYTLVPNFKSWL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 70/246 (28%)
LOC548809NP_001016055.2 Tryp_SPc 58..297 CDD:238113 70/246 (28%)

Return to query results.
Submit another query.