DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and Jon99Cii

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster


Alignment Length:244 Identity:79/244 - (32%)
Similarity:114/244 - (46%) Gaps:33/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KLLDNRIVGGQEAEDGVAPYQVSI-----QTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRI 88
            |.:..||..|..|.:|..||.|.:     ...|    |.|.|:...|:|||.||....|  .:.|
  Fly    30 KDIQGRITNGYPAYEGKVPYIVGLLFSGNGNWW----CGGSIIGNTWVLTAAHCTNGAS--GVTI 88

  Fly    89 IVGTNDRLEPGQT--LFPDEALVHCLYDIPYVYNNDIALI---HVNESIIFNDRTQIVEL----S 144
            ..|.:.|.:|..|  :...:.:.|..|:...:: |||:||   ||:...:.|.    |||    .
  Fly    89 NYGASIRTQPQYTHWVGSGDIIQHHHYNSGNLH-NDISLIRTPHVDFWSLVNK----VELPSYND 148

  Fly   145 REQPPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHICTFTREGEG 209
            |.|..||.....:|||......|...:||::::.||:..:|...|..||.:    ||..|..|:.
  Fly   149 RYQDYAGWWAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCSRTWSLHDNM----ICINTDGGKS 209

  Fly   210 ACSGDSGGPLMWE--GKLVGLVNWGRA--CGVGMPDMYANTVYYQDWIR 254
            .|.|||||||:..  .:|||:.::|.|  |..|.|.:::....|.||||
  Fly   210 TCGGDSGGPLVTHDGNRLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWIR 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 75/236 (32%)
Tryp_SPc 35..256 CDD:238113 77/238 (32%)
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 77/238 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25816
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.