DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and modSP

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:268 Identity:63/268 - (23%)
Similarity:91/268 - (33%) Gaps:73/268 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GGQEAEDGVAPYQVSIQTIWKT----HI-CSGVILNEQWILTAGHCALD------FSIEDLRIIV 90
            ||....:.|.|:.|.:. :|..    |. |.|.:|....::||.||..|      :|.:..|:|.
  Fly   371 GGYTINNTVVPWHVGLY-VWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIA 434

  Fly    91 GTNDRLEPGQTLFPDEALVHCLYDIPYV------------YNNDIALIHVNESIIFNDRTQIVEL 143
            ....| ..|:|. |:|.    ..|:..:            |..|:||:.::|..         ||
  Fly   435 AKFYR-NYGETT-PEEK----RRDVRLIEIAPGYKGRTENYYQDLALLTLDEPF---------EL 484

  Fly   144 SREQPPAGSTVTLTGWGAPESSYPTVQ------------YLQTLNLTIIAHEECRERWDFHDGID 196
            |....|.  .||...:...||....||            .||.:.....::..||.  :..| |.
  Fly   485 SHVIRPI--CVTFASFAEKESVTDDVQGKFAGWNIENKHELQFVPAVSKSNSVCRR--NLRD-IQ 544

  Fly   197 IGHICTFTREGEGACSGDSGGPLMWEGKLVGLVNWGRA----------------CGVGMPDMYAN 245
            ....|.||:....||.|||||....|........|..|                |...:..| .|
  Fly   545 ADKFCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARHFLFGVISNAPNADQCAHSLTVM-TN 608

  Fly   246 TVYYQDWI 253
            ..:::|.|
  Fly   609 IQHFEDMI 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 63/268 (24%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 62/266 (23%)
Blue background indicates that the domain is not in the aligned region.

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