DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and Sb

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster


Alignment Length:260 Identity:73/260 - (28%)
Similarity:115/260 - (44%) Gaps:56/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DNRIVGGQEAEDGVAPYQVSIQT-----IWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVG 91
            :.|||||:.|..|..|:|||::.     ...||.|.|.::||.||.|||||..|..|..:||.||
  Fly   541 ETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVG 605

  Fly    92 TNDRLEPGQTLFPDEALVHCLYDIPYV-----------------YNNDIALIHVNESIIFNDRTQ 139
            ..|             ..|....:||:                 |..|:||:.:.:.:.|.....
  Fly   606 EYD-------------FSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVS 657

  Fly   140 IVEL-SREQPPAGSTVTLTGWG--APESSYPTVQYLQTLNLTIIAHEECRE------RWDFHDGI 195
            .:.| ..:....|...|:||||  :...:.|:|  ||.:::.|::::.|:.      |.:|...|
  Fly   658 PICLPETDSLLIGMNATVTGWGRLSEGGTLPSV--LQEVSVPIVSNDNCKSMFMRAGRQEFIPDI 720

  Fly   196 DIGHICT-FTREGEGACSGDSGGPLMWEGK-----LVGLVNWGRACG-VGMPDMYANTVYYQDWI 253
               .:|. :...|:.:|.|||||||..:.:     |.|:::||..|. ..:|.:......:..||
  Fly   721 ---FLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782

  Fly   254  253
              Fly   783  782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 72/257 (28%)
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 72/257 (28%)

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