DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and Corin

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:280 Identity:89/280 - (31%)
Similarity:140/280 - (50%) Gaps:45/280 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSI----QTIWKTHICSGVILNEQWILTAGHCAL 79
            |.||:...:|     ||:||.:|..|..|:..:|    :.|:   .|:||::::||:|||.||..
  Fly  1093 VKRGRHKPSR-----RIIGGTQASPGNWPFLAAILGGPEKIF---YCAGVLISDQWVLTASHCVG 1149

  Fly    80 DFSI---EDLRIIVGT---NDRLEPGQTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRT 138
            ::|:   ||..|.:|.   |.....||.:.....:.|..|::...::|||||..:...:.|::..
  Fly  1150 NYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHL 1214

  Fly   139 QIVELSREQPPA------GSTVTLTGWGAPESSYP--TVQYL-QTLNLTIIAHEECRERWDFHDG 194
            ..|.|   .||:      |:..|:.|||..|...|  |.:|: ..:.:.||...:|.| |..:..
  Fly  1215 LPVCL---PPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDE-WLDNLT 1275

  Fly   195 IDIGHICT-FTREGEGACSGDSGGPLM--WEGK-----LVGLVNWGRACG-VGMPDMYANTVYYQ 250
            :..|.:|. |...|:.||.|||||||:  :.|:     :.|:|:||..|. ..:|.:|||.|.|.
  Fly  1276 VSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYV 1340

  Fly   251 DWIRR---THSG--CKNRVN 265
            .||:.   .||.  .::|||
  Fly  1341 PWIQEQIAKHSRPIKEDRVN 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 79/251 (31%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 79/248 (32%)
Blue background indicates that the domain is not in the aligned region.

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