DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and CG17571

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:263 Identity:76/263 - (28%)
Similarity:136/263 - (51%) Gaps:31/263 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSLIWLLLLGTSIDVTRGKRLDNRKLLD---NRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVIL 66
            ||::.|:.|..|.....|        ||   .|||.|::.:....|||||:||...:|.|.|.::
  Fly     6 LSVVALVALAASCHGNPG--------LDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLI 62

  Fly    67 NEQWILTAGHCALDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHCLYDIPYVYNNDIALIHVNES 131
            :.:.:|||.||...::..:|::.||:..|...|:.:.......|..|:...:. ||:|:|.::..
  Fly    63 DSETVLTAAHCMQSYAASELQVRVGSTSRSSGGEVVTVRAFKYHEGYNSKLMI-NDVAIIKLSSP 126

  Fly   132 IIFNDRTQIVELSREQPPAGSTVTLTGWG--------APESSYPTVQYLQTLNLTIIAHEEC-RE 187
            :....:.:.:||:..:..:|:...::|||        :|::       ||.:.:.::.:::| .:
  Fly   127 VRQTSKIRAIELADSEAVSGTNAVVSGWGTTCFLFCSSPDT-------LQKVEVDLLHYKDCAAD 184

  Fly   188 RWDF-HDGIDIGHICTFTREGEGACSGDSGGPLMWEGKLVGLVNWGRACG-VGMPDMYANTVYYQ 250
            .::: .|.|....:|. |.|.:.||.|||||||:.:.||||:|:||..|. .|.|.:||:....:
  Fly   185 TYNYGSDSILETMVCA-TGEKKDACQGDSGGPLVADNKLVGVVSWGSGCAWTGYPGVYADVASLR 248

  Fly   251 DWI 253
            .||
  Fly   249 SWI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 66/229 (29%)
Tryp_SPc 35..256 CDD:238113 67/230 (29%)
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 66/229 (29%)
Tryp_SPc 31..254 CDD:238113 67/230 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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