DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and CG4650

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster


Alignment Length:284 Identity:57/284 - (20%)
Similarity:102/284 - (35%) Gaps:88/284 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LDNR---IVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGHC--ALDFSIEDLRIIV 90
            ||.|   :..|:.|.:..:|:...:.|....::|.|.::.|:.:|||.||  |.:..:..:...:
  Fly    24 LDGRCGLLTNGKIANNISSPWMAYLHTSELLYVCGGTVITEKLVLTAAHCTRASEQLVARIGEFI 88

  Fly    91 GTNDRLEPGQTLFPD----EALVHCLYDIPYVYNNDIALIHVNESIIFN---------------- 135
            ||:|   ...|:..:    :..:|.||:.. ...||||::.:...|:|:                
  Fly    89 GTDD---ANDTMLSEYQVSQTFIHSLYNTT-TSANDIAILGLATDIVFSKTIRPICIVWWTIWRK 149

  Fly   136 --DRTQIVELSREQPPAGSTVTLTGWGAPESSYPT------------VQYLQTLNLTIIAHEECR 186
              |..|:  ||..|           ||.|.....:            .....|||.|.|...:  
  Fly   150 YIDNIQV--LSGAQ-----------WGLPNDRNESDAFRITDIRRQPANMCSTLNGTAILSSQ-- 199

  Fly   187 ERWDFHDGIDIGHICTFTREGEGACSGDSGGPLMWEGKLVGLVNWGRACGVGM---------PDM 242
                         .|....:.: .|:.|...||   |.::...|..|...:|:         ..:
  Fly   200 -------------FCAGDSDSK-LCNVDFSSPL---GAIITFKNIQRYVLIGIATTNQKCKRASV 247

  Fly   243 YANTVYYQDWI----RRTHSGCKN 262
            |.:.:.:.|:|    |:..:|.|:
  Fly   248 YTDVLSHTDFILSVWRQYRNGEKS 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 52/269 (19%)
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 50/260 (19%)

Return to query results.
Submit another query.