DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and Send2

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster


Alignment Length:231 Identity:73/231 - (31%)
Similarity:117/231 - (50%) Gaps:38/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRL 96
            :.||:|||......||:|||||...| |:|.|.|.:...|:||.||           :.|...::
  Fly    24 EERIIGGQPIGIEEAPWQVSIQRDGK-HLCGGSIYSADIIITAAHC-----------VQGQGYQV 76

  Fly    97 EPGQTLFPDEALVHCLYDIPYV-----YNNDIALIHVNESIIFNDRTQIVELSREQPPAGSTVTL 156
            ..|..|......|   .|:..:     ..||||::.:::.:.|.::.|.:.|::..||.||...:
  Fly    77 RAGSALKNSNGSV---VDVAAIRTHEGLGNDIAIVRLSKPLEFTNQVQPIPLAKTNPPPGSIAFV 138

  Fly   157 TGWGAPESSYPTVQYLQTLNLTIIAHEECRERWDFHDGI-DIGHIC--TFTREGEGACSGDSGGP 218
            :|||: .|.|.....||.:||.|        :|.::.|: :...||  :|   |..||.||||||
  Fly   139 SGWGS-SSYYSHPIDLQGVNLYI--------QWPYYCGLTEPSRICAGSF---GRAACKGDSGGP 191

  Fly   219 LMWEGKLVGLVNWG-RACGVGMPDMYANTVYYQDWI 253
            |:::.:|||:|:.| :.|...  .:|.:..|:::||
  Fly   192 LVFDQQLVGVVSGGTKDCTYS--SIYTSVPYFREWI 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 71/227 (31%)
Tryp_SPc 35..256 CDD:238113 72/228 (32%)
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 71/227 (31%)
Tryp_SPc 27..225 CDD:238113 70/226 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449458
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.