DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:262 Identity:66/262 - (25%)
Similarity:108/262 - (41%) Gaps:68/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGQEAEDGVAPYQVSIQTIWKT--HICSGVILNEQWILTAGHCALDFSIEDLRII------- 89
            |||||..|.....|:   |..::|:  ..|.|.::....||||.||....:..|:..:       
  Fly   399 RIVGGINASPHEFPW---IAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGDY 460

  Fly    90 -VGTNDRLEPGQTLFPDEALVHCLYDIPYV-----------------YNNDIALIHVNESIIFND 136
             :||:                   :::.:|                 .:||:|::.::|.:.|..
  Fly   461 NIGTD-------------------FEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTR 506

  Fly   137 RTQIVEL-----SREQPPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERWD--FHDG 194
            ..|.:.|     .:.:..:|...|:.|||:...:.|....||.:::.|..:.||..::.  ...|
  Fly   507 EIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGG 571

  Fly   195 IDIGHICTFTREGEGA---CSGDSGGPLMWE--GKL--VGLVNWGRACGVGM-PDMYANTVYYQD 251
            |....||.    |:.|   ||||||||::..  |:.  ||:|:||..||.|. |.:|........
  Fly   572 IIESMICA----GQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLP 632

  Fly   252 WI 253
            ||
  Fly   633 WI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 65/261 (25%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 65/261 (25%)
Blue background indicates that the domain is not in the aligned region.

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