DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and Jon25Biii

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:281 Identity:83/281 - (29%)
Similarity:119/281 - (42%) Gaps:48/281 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVRLSLIWLLLLGTSI--DVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTI---WKTHI 60
            |.|.|:::.|.:...|.  :....|.|.....::.||..|..|.:|.|||.|.:...   |    
  Fly     1 MKVFLAILALAVASASAFDEKVFVKDLPKATKIEGRITNGYAAPEGKAPYTVGLGFSGGWW---- 61

  Fly    61 CSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHCLYDIPYV--YNNDI 123
            |.|.|:...|:|||.||     |.|...::     :..|.|...:....|.:.:..::  .|.||
  Fly    62 CGGSIIAHDWVLTAEHC-----IGDAASVI-----VYFGATWRTNAQFTHTVGNGNFIKHSNADI 116

  Fly   124 ALI---HVN--------ESIIFNDRTQIVELSREQPPAGSTVTLTGWGAPESSYPTVQYLQTLNL 177
            |||   ||:        |...:|||.....        .......|||......|...:||.::|
  Fly   117 ALIRIPHVDFWHMVNKVELPSYNDRYNNYN--------EWWAVACGWGGTYDGSPLPDWLQCVDL 173

  Fly   178 TIIAHEECRERWDFHDGIDIGHICTFTREGEGACSGDSGGPLMWE--GKLVGLVNW--GRACGVG 238
            .|:.:|||  .|.: ..:....|||.|.:|:..|.|||||||:..  .||||:.|:  ...|..|
  Fly   174 QIVHNEEC--GWTY-GSVGDNVICTRTVDGKSICGGDSGGPLVTHDGSKLVGVSNFVSSNGCQSG 235

  Fly   239 MPDMYANTVYYQDWIRRTHSG 259
            .|..:....|:.||| |.|:|
  Fly   236 APAGFQRVTYHLDWI-RDHTG 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 71/238 (30%)
Tryp_SPc 35..256 CDD:238113 72/240 (30%)
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 71/238 (30%)
Tryp_SPc 37..253 CDD:238113 73/241 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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