DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and CG4653

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster


Alignment Length:256 Identity:68/256 - (26%)
Similarity:120/256 - (46%) Gaps:24/256 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLIWLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQW 70
            |.:.||::..::.|.:..||              .||.|..|:.:|::.. ..|:|.|.::.|:|
  Fly    10 SRLLLLVVIVTLGVVQSSRL--------------PAEVGSQPHSISLRRN-GVHVCGGALIREKW 59

  Fly    71 ILTAGHCA------LDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHCLY-DIPYVYNNDIALIHV 128
            ||||.||.      ..:..:...:.||:..||..||.:...:.::|..| ....|.:||:||:.:
  Fly    60 ILTAAHCVSLGGGQQSYPAKSYNVRVGSIQRLTGGQLVPLSKIIIHTNYSSSDAVGSNDLALLEL 124

  Fly   129 NESIIFNDRTQIVELSREQPPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERWDFHD 193
            ..|::.|..|..::|:.|:|.|||.:..:|||:.:........||......::..:|:... :..
  Fly   125 ETSVVLNANTNPIDLATERPAAGSQIIFSGWGSSQVDGSLSHVLQVATRQSLSASDCQTEL-YLQ 188

  Fly   194 GIDIGHICTFTREGEGACSGDSGGPLMWEGKLVGLVN-WGRACGVGMPDMYANTVYYQDWI 253
            ..|:..:.....:..|.||||:|.|..:..:|||:.. :...||...||.|.:...:.:||
  Fly   189 QEDLLCLSPVDEDFAGLCSGDAGAPASYNNQLVGIAAFFVSGCGSEQPDGYVDVTQHLEWI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 60/226 (27%)
Tryp_SPc 35..256 CDD:238113 62/227 (27%)
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 62/222 (28%)
Tryp_SPc 30..249 CDD:214473 60/220 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.